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| # | Team | P | W | D | L | Goals | Pts |
|---|---|---|---|---|---|---|---|
| 1 | Minija | 30 | 24 | 2 | 4 | 79:22 | 74 |
| 2 | Babrungas | 30 | 23 | 5 | 2 | 57:15 | 74 |
| 3 | Be1 NFA | 30 | 18 | 5 | 7 | 52:32 | 59 |
| 4 | Žalgiris II | 30 | 16 | 5 | 9 | 48:39 | 53 |
| 5 | Tauras | 30 | 15 | 6 | 9 | 56:42 | 51 |
| 6 | BFA | 30 | 15 | 5 | 10 | 47:42 | 50 |
| 7 | Dainava | 30 | 13 | 9 | 8 | 45:30 | 48 |
| 8 | Neptūną Klaipėda | 30 | 14 | 3 | 13 | 34:38 | 45 |
| 9 | Atmosfera | 30 | 11 | 8 | 11 | 49:39 | 41 |
| 10 | Jonava | 30 | 8 | 8 | 14 | 34:41 | 32 |
| 11 | Garliava | 30 | 8 | 6 | 16 | 35:40 | 30 |
| 12 | Kauno Žalgiris II | 30 | 9 | 2 | 19 | 29:52 | 29 |
| 13 | Transinvest 2 | 30 | 8 | 5 | 17 | 39:67 | 29 |
| 14 | Hegelmann II | 30 | 8 | 4 | 18 | 37:66 | 28 |
| 15 | FA Šiauliai II | 30 | 4 | 6 | 20 | 35:73 | 18 |
| 16 | Ekranas | 30 | 5 | 3 | 22 | 30:68 | 18 |